use pyo3::prelude::*; use pyo3::types::PyList; use pyo3::wrap_pyfunction; use serde::Serialize; use serde_json; #[derive(Clone, Debug, Serialize)] struct Point { value: u32, } impl Point { fn new(value: u32) -> Self { Point { value } } } #[derive(Debug, Clone, Serialize)] struct ClusterGapInfo { span_length: f32, num_elements: usize, centroid: f32, z_score: Option, } fn create_cluster_info(cluster: &[Point]) -> ClusterGapInfo { let num_elements = cluster.len(); let span_length = (cluster.last().unwrap().value as f32) - (cluster.first().unwrap().value as f32); let centroid = cluster.iter().map(|p| p.value as f32).sum::() / num_elements as f32; ClusterGapInfo { span_length, num_elements, centroid, z_score: None, } } /// Calculates the densities (clusters) and significant gaps between points in a dataset. /// /// This function iterates over a dataset of points, identifying clusters based on a distance threshold /// (calculated from the mean distance between points and adjusted by a given factor) and identifying significant gaps /// that exceed a certain threshold. Each cluster or significant gap identified is summarized in a `ClusterGapInfo` object. /// /// # Arguments /// * `dataset`: A slice of `Point` objects representing the dataset to be analyzed. /// * `factor`: A multiplier used to define the thresholds for clustering and gap identification. /// A lower factor tightens the cluster threshold and widens the gap threshold, and vice versa. /// * `min_cluster_size`: The minimum number of points required for a group of points to be considered a cluster. /// /// # Returns /// A vector of `ClusterGapInfo` objects, each representing either a cluster of points or a significant gap between points. /// fn calculate_densities_and_gaps(dataset: &[Point], factor: f32, min_cluster_size: usize) -> Vec { // Return early if the dataset is too small to form any clusters or gaps. if dataset.len() < 2 { return Vec::new(); } // Calculate the mean distance between consecutive points in the dataset. let mean_distance = dataset.windows(2) .map(|w| w[1].value as f32 - w[0].value as f32) .sum::() / (dataset.len() - 1) as f32; // Define thresholds for clustering and gap identification based on the mean distance and factor. let cluster_threshold = mean_distance / factor; let gap_threshold = factor * mean_distance * 2.0; let mut results: Vec = Vec::new(); // Stores the resulting clusters and gaps. let mut current_cluster: Vec = Vec::new(); // Temporary storage for points in the current cluster. // Iterate through pairs of consecutive points to find clusters and significant gaps. for window in dataset.windows(2) { let gap_distance = window[1].value as f32 - window[0].value as f32; // If the distance between points is within the cluster threshold, add to current cluster. if gap_distance <= cluster_threshold { if current_cluster.is_empty() { current_cluster.push(window[0].clone()); // Start a new cluster with the first point. } current_cluster.push(window[1].clone()); // Add the second point to the cluster. } else { // If the current cluster is large enough, finalize it and prepare for a new cluster. if !current_cluster.is_empty() && current_cluster.len() >= min_cluster_size { results.push(create_cluster_info(¤t_cluster)); current_cluster.clear(); } // If the gap between points is significant, record it as a gap. if gap_distance > gap_threshold { results.push(ClusterGapInfo { span_length: gap_distance, num_elements: 0, // Indicating this is a gap, not a cluster. centroid: (window[0].value as f32 + window[1].value as f32) / 2.0, z_score: None, // Z-score will be calculated later if necessary. }); } } } // Finalize the last cluster if it meets the size requirement. if !current_cluster.is_empty() && current_cluster.len() >= min_cluster_size { results.push(create_cluster_info(¤t_cluster)); } results } /// A Python-exposed function that analyzes a list of numerical values to identify clusters and significant gaps, /// calculates z-scores for each identified cluster/gap, and returns the analysis results as a JSON string. /// /// This function takes a list of integers (representing a dataset), a factor to adjust clustering and gap detection thresholds, /// and a minimum cluster size. It calculates the mean distance and standard deviation across the dataset, /// identifies clusters and significant gaps based on these metrics, calculates z-scores for each cluster/gap, /// and returns a JSON string representing the analysis results. /// /// # Arguments /// * `_py`: The Python interpreter, used for Python-Rust interactions. Not directly used in the function body. /// * `int_list`: A Python list of integers representing the dataset to be analyzed. /// * `factor`: A floating-point value used to adjust the sensitivity of cluster and gap detection. /// Lower values result in tighter clustering and wider gaps, while higher values do the opposite. /// * `min_cluster_size`: The minimum number of contiguous points required to be considered a cluster. /// /// # Returns /// A `PyResult` which is either: /// * Ok containing a JSON-formatted string of the analysis results, including clusters and gaps with their z-scores. /// * Err containing a Python exception if an error occurs during processing or JSON serialization. /// #[pyfunction] fn lyagushka(_py: Python, int_list: &PyList, factor: f32, min_cluster_size: usize) -> PyResult { // Convert the Python list of integers into a Rust Vec of Point structs. let dataset: Vec = int_list.into_iter() .map(|py_any| py_any.extract::().map(Point::new)) .collect::>>()?; // Analyze the dataset to identify clusters and significant gaps. let mut cluster_gap_infos = calculate_densities_and_gaps(&dataset, factor, min_cluster_size); // Calculate the mean distance between consecutive points in the dataset. let mean_distance: f32 = dataset.windows(2) .map(|w| w[1].value as f32 - w[0].value as f32) .sum::() / (dataset.len() - 1) as f32; // Calculate the standard deviation of distances between consecutive points. let std_deviation: f32 = (dataset.windows(2) .map(|w| w[1].value as f32 - w[0].value as f32 - mean_distance) .map(|d| d * d) .sum::() / (dataset.len() - 1) as f32) .sqrt(); // Calculate and assign z-scores for each cluster/gap based on their centroid or span length. for info in cluster_gap_infos.iter_mut() { info.z_score = Some(if info.num_elements > 0 { // For clusters, use the centroid for z-score calculation. (info.centroid - mean_distance) / std_deviation } else { // For gaps, use the span length for z-score calculation. (info.span_length - mean_distance) / std_deviation }); } // Serialize the analysis results into a JSON string and return it. serde_json::to_string_pretty(&cluster_gap_infos) .map_err(|e| PyErr::new::(format!("JSON Serialization Error: {}", e))) } #[pymodule] fn lyagushka_module(_py: Python, m: &PyModule) -> PyResult<()> { m.add_function(wrap_pyfunction!(lyagushka, m)?)?; Ok(()) }